Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 73 (from 73) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*03:01:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DQB1*05:01:01-DPA1*01:03:01-DPB1*04:01:01  Brazil Rio de Janeiro Parda 0.5882170
 2  A*11:01:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DQB1*04:01:01  Vietnam Kinh 0.4950101
 3  A*24:02-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.266018,604
 4  A*02:07-B*40:01-C*03:04-DRB1*04:05-DQB1*04:01  Malaysia Peninsular Chinese 0.2577194
 5  A*24:02-B*40:01-C*03:04-DRB1*04:05  Germany DKMS - China minority 0.23401,282
 6  A*02:01-B*40:01-C*03:04-DRB1*04:05-DQB1*02:01  USA NMDP Alaska Native or Aleut 0.20251,376
 7  A*24:02-B*40:01-C*03:04-DRB1*04:05-DQB1*04:01  USA Asian pop 2 0.17801,772
 8  A*02:01-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.172018,604
 9  A*11:01-B*40:01-C*03:04-DRB1*04:05  Hong Kong Chinese BMDR 0.16847,595
 10  A*24:02-B*40:01-C*03:04-DRB1*04:05  Hong Kong Chinese BMDR 0.13287,595
 11  A*24:02-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.13003,078
 12  A*11:01:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.11115,266
 13  A*02:01-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.10003,078
 14  A*02:06-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.10003,078
 15  A*24:02-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.10003,078
 16  A*02:06-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.094018,604
 17  A*24:02:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.08721,734
 18  A*02:01:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.08651,734
 19  A*11:01-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.078018,604
 20  A*31:01-B*40:01-C*03:04-DRB1*04:05  Germany DKMS - China minority 0.07801,282
 21  A*11:01-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*03:01  Japan pop 17 0.07003,078
 22  A*02:03-B*40:01-C*03:04-DRB1*04:05  Hong Kong Chinese BMDR 0.06307,595
 23  A*11:01-B*40:01-C*03:04-DRB1*04:05  Germany DKMS - Bosnia and Herzegovina minority 0.06101,028
 24  A*02:06:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.05771,734
 25  A*03:01-B*40:01-C*03:04-DRB1*04:05-DQB1*04:01  Malaysia Peninsular Malay 0.0526951
 26  A*11:01-B*40:01-C*03:04-DRB1*04:05-DQB1*03:02  Malaysia Peninsular Malay 0.0526951
 27  A*26:01-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.052018,604
 28  A*24:02:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.04805,266
 29  A*24:02-B*40:01-C*03:04-DRB1*04:05-DQB1*03:01  USA Hispanic pop 2 0.04701,999
 30  A*02:01-B*40:01-C*03:04-DRB1*04:05-DQB1*04:01  USA Asian pop 2 0.04601,772
 31  A*11:01-B*40:01-C*03:04-DRB1*04:05-DQB1*04:01  USA Asian pop 2 0.04401,772
 32  A*32:01-B*40:01-C*03:04-DRB1*04:05-DQB1*04:02  USA Asian pop 2 0.04401,772
 33  A*02:01-B*40:01-C*03:04-DRB1*04:05  Hong Kong Chinese BMDR 0.04337,595
 34  A*11:01-B*40:01-C*03:04-DRB1*04:05  Germany DKMS - China minority 0.03901,282
 35  A*02:01-B*40:01-C*03:04-DRB1*04:05  Germany DKMS - France minority 0.03601,406
 36  A*02:03:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.03445,266
 37  A*02:01-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*03:01  Japan pop 17 0.03003,078
 38  A*02:01-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 39  A*02:01-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*05:01  Japan pop 17 0.03003,078
 40  A*02:01-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*41:01  Japan pop 17 0.03003,078
 41  A*11:01-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 42  A*24:02-B*40:01-C*03:04-DRB1*04:05-DQA1*03:01-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 43  A*24:02-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*03:01  Japan pop 17 0.03003,078
 44  A*24:02-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 45  A*24:02-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*02:01  Japan pop 17 0.03003,078
 46  A*24:07-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*04:01-DPB1*13:01  Japan pop 17 0.03003,078
 47  A*26:01-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*03:01  Japan pop 17 0.03003,078
 48  A*02:07:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02915,266
 49  A*31:01-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.026018,604
 50  A*02:06-B*40:01-C*03:04-DRB1*04:05  Hong Kong Chinese BMDR 0.02567,595
 51  A*02:03:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*03:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02145,266
 52  A*24:20-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.021018,604
 53  A*26:03-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.021018,604
 54  A*11:01-B*40:01-C*03:04-DRB1*04:05-DQB1*05:02  India East UCBB 0.02082,403
 55  A*11:01:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*13:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02005,266
 56  A*03:01-B*40:01-C*03:04-DRB1*04:05  Hong Kong Chinese BMDR 0.01277,595
 57  A*24:02:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01075,266
 58  A*02:05-B*40:01-C*03:04-DRB1*04:05-DQB1*04:01  Germany DKMS - Turkey minority 0.01004,856
 59  A*74:02:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*03:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00955,266
 60  A*11:01:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*03:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00945,266
 61  A*31:01:02-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*04:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00945,266
 62  A*11:01:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.00915,266
 63  A*26:01:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00885,266
 64  A*11:01:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00785,266
 65  A*31:01:02-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00645,266
 66  A*02:07:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*13:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00605,266
 67  A*02:07-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.005018,604
 68  A*11:02-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.005018,604
 69  A*24:07-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.005018,604
 70  A*26:02-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.005018,604
 71  A*33:03-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.005018,604
 72  A*11:02:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00475,266
 73  A*03:01:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DQB1*03:03:02  Poland BMR 0.002123,595

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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